OBO Foundry dashboard analysis¶

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/tmp/ipykernel_351/4293058459.py:21: FutureWarning:

The `inplace` parameter in pandas.Categorical.reorder_categories is deprecated and will be removed in a future version. Reordering categories will always return a new Categorical object.

Ontologies by number of axioms

Ontologies by number of classes

Ontologies by how many ontologies use it

Different serialisations used

Turtle    1
Name: syntax, dtype: int64

Breakdown of used Axiom Types

count mean std min 25% 50% 75% max
AnnotationAssertion 1 20754.0 NaN 20754.0 20754.0 20754.0 20754.0 20754.0
AnnotationPropertyDomain 1 1.0 NaN 1.0 1.0 1.0 1.0 1.0
SymmetricObjectProperty 1 8.0 NaN 8.0 8.0 8.0 8.0 8.0
SubPropertyChainOf 1 34.0 NaN 34.0 34.0 34.0 34.0 34.0
SubObjectPropertyOf 1 303.0 NaN 303.0 303.0 303.0 303.0 303.0
SubDataPropertyOf 1 10.0 NaN 10.0 10.0 10.0 10.0 10.0
SubClassOf 1 4600.0 NaN 4600.0 4600.0 4600.0 4600.0 4600.0
SubAnnotationPropertyOf 1 88.0 NaN 88.0 88.0 88.0 88.0 88.0
ObjectPropertyRange 1 94.0 NaN 94.0 94.0 94.0 94.0 94.0
ObjectPropertyDomain 1 93.0 NaN 93.0 93.0 93.0 93.0 93.0
ObjectPropertyAssertion 1 2030.0 NaN 2030.0 2030.0 2030.0 2030.0 2030.0
IrrefexiveObjectProperty 1 4.0 NaN 4.0 4.0 4.0 4.0 4.0
InverseObjectProperties 1 89.0 NaN 89.0 89.0 89.0 89.0 89.0
InverseFunctionalObjectProperty 1 3.0 NaN 3.0 3.0 3.0 3.0 3.0
FunctionalObjectProperty 1 7.0 NaN 7.0 7.0 7.0 7.0 7.0
FunctionalDataProperty 1 4.0 NaN 4.0 4.0 4.0 4.0 4.0
EquivalentClasses 1 185.0 NaN 185.0 185.0 185.0 185.0 185.0
DisjointClasses 1 29.0 NaN 29.0 29.0 29.0 29.0 29.0
Declaration 1 4936.0 NaN 4936.0 4936.0 4936.0 4936.0 4936.0
DataPropertyRange 1 24.0 NaN 24.0 24.0 24.0 24.0 24.0
DataPropertyDomain 1 2.0 NaN 2.0 2.0 2.0 2.0 2.0
DataPropertyAssertion 1 6122.0 NaN 6122.0 6122.0 6122.0 6122.0 6122.0
ClassAssertion 1 1368.0 NaN 1368.0 1368.0 1368.0 1368.0 1368.0
AsymmetricObjectProperty 1 4.0 NaN 4.0 4.0 4.0 4.0 4.0
AnnotationPropertyRangeOf 1 3.0 NaN 3.0 3.0 3.0 3.0 3.0
TransitiveObjectProperty 1 50.0 NaN 50.0 50.0 50.0 50.0 50.0

Breakdown of used OWL Class Expression constructs

count mean std min 25% 50% 75% max
Class 1 14695.0 NaN 14695.0 14695.0 14695.0 14695.0 14695.0
DataAllValuesFrom 1 7.0 NaN 7.0 7.0 7.0 7.0 7.0
DataExactCardinality 1 5.0 NaN 5.0 5.0 5.0 5.0 5.0
DataHasValue 1 4.0 NaN 4.0 4.0 4.0 4.0 4.0
DataMaxCardinality 1 6.0 NaN 6.0 6.0 6.0 6.0 6.0
ObjectAllValuesFrom 1 55.0 NaN 55.0 55.0 55.0 55.0 55.0
ObjectComplementOf 1 2.0 NaN 2.0 2.0 2.0 2.0 2.0
ObjectExactCardinality 1 3.0 NaN 3.0 3.0 3.0 3.0 3.0
ObjectHasValue 1 137.0 NaN 137.0 137.0 137.0 137.0 137.0
ObjectIntersectionOf 1 477.0 NaN 477.0 477.0 477.0 477.0 477.0
ObjectMaxCardinality 1 2.0 NaN 2.0 2.0 2.0 2.0 2.0
ObjectMinCardinality 1 3.0 NaN 3.0 3.0 3.0 3.0 3.0
ObjectSomeValuesFrom 1 1425.0 NaN 1425.0 1425.0 1425.0 1425.0 1425.0
ObjectUnionOf 1 63.0 NaN 63.0 63.0 63.0 63.0 63.0

OBO Score (Experimental)

ontology score score_dash score_impact
0 afo 0.374 0.749 0.0

OBO Score Summary

count mean std min 25% 50% 75% max
score 1.0 0.374 NaN 0.374 0.374 0.374 0.374 0.374
score_dash 1.0 0.749 NaN 0.749 0.749 0.749 0.749 0.749
score_impact 1.0 0.000 NaN 0.000 0.000 0.000 0.000 0.000

OBO dependency graph